{"id":8816,"date":"2025-02-01T08:00:00","date_gmt":"2025-02-01T08:00:00","guid":{"rendered":"https:\/\/www.raziemah.com\/blog\/?p=8816"},"modified":"2024-12-14T20:17:47","modified_gmt":"2024-12-14T20:17:47","slug":"category-based-diagrams-of-biosemiosis-and-molecular-interactions-2","status":"publish","type":"post","link":"https:\/\/www.raziemah.com\/blog\/?p=8816","title":{"rendered":"Looking at Gustavo Caetano-Anolles&#8217; Chapter (2024) &#8220;Evolution of Biomolecular Communication&#8221; (Part 10 of 10)"},"content":{"rendered":"\n<p>0388 I conclude&nbsp;<em>this examination of Gustavo Caetano-Anolles&#8217; chapter<\/em>&nbsp;with a brief discussion on the third item appearing in section 10.3, titled, &#8220;Communication&#8221;.<\/p>\n\n\n\n<p>0389&nbsp;<em>The first item that the author mentions<\/em>&nbsp;is&nbsp;<em>Peirce&#8217;s tradition of inquiry<\/em>.&nbsp;&nbsp;Peirce&#8217;s three categories offer a variety of ways to portray triadic relations.<\/p>\n\n\n\n<p>Biosemiotics is all about triadic relations.&nbsp;&nbsp;This examination has shown that&nbsp;<em>secondness<\/em>&nbsp;tends to associate to&nbsp;<em>phenomena<\/em>.&nbsp;&nbsp;<em>Thirdness and firstness<\/em>&nbsp;tends to associate to&nbsp;<em>what models need to explain<\/em>.<\/p>\n\n\n\n<p>0390&nbsp;<em>The second item that the author mentions<\/em>&nbsp;is&nbsp;<em>Shannon&#8217;s information theory<\/em>.<\/p>\n\n\n\n<p>I wonder about the implications of&nbsp;<em>the virtual nested form in the realm of secondness<\/em>&nbsp;that Shannon&#8217;s information theory generates.<\/p>\n\n\n\n<p>What if the associations are more than mere analogy?<\/p>\n\n\n\n<p>What if&nbsp;<em>my neighbor,<\/em>&nbsp;getting that new-fangled lumber treatment and all, is not sending me a message through&nbsp;<em>a channel<sub>2b<\/sub><\/em>&nbsp;that conducts&nbsp;<em>wood-eating insects that are not happy, and frankly, fed up<\/em>&nbsp;with&nbsp;<em>the wooden food-fare that my neighbor&#8217;s shed now offers?<\/em><\/p>\n\n\n\n<p>How weird and disturbing is that?<\/p>\n\n\n\n<p>0391&nbsp;<em>The third item that the author mentions<\/em>&nbsp;is&nbsp;<em>Chomsky&#8217;s hierarchy of formal languages<\/em>.&nbsp;&nbsp;<em>Formal language<\/em>&nbsp;consists of&nbsp;<em>operations within a finite symbolic order<\/em>.<\/p>\n\n\n\n<p>0392 Finite symbolic order?<\/p>\n\n\n\n<p>Think of how Charles Peirce might rebrand Ferdinand de Saussures&#8217;s key term,&nbsp;<em>system of differences<\/em>.<\/p>\n\n\n\n<p>0393 Ultimately, symbols enter into a picture of&nbsp;<em>the evolution of biomolecular communication<\/em>.<\/p>\n\n\n\n<p>And, when they do, they seem to associate to &#8220;a receiver<sub>2c<\/sub>&#8221; in&nbsp;<em>Shannon&#8217;s virtual nested form in secondness<\/em>.<\/p>\n\n\n\n<p>0392 Here is a picture.<\/p>\n\n\n\n<figure class=\"wp-block-image size-full\"><a href=\"https:\/\/www.raziemah.com\/blog\/wp-content\/uploads\/2024\/12\/Slide126.png\"><img loading=\"lazy\" decoding=\"async\" width=\"600\" height=\"400\" src=\"https:\/\/www.raziemah.com\/blog\/wp-content\/uploads\/2024\/12\/Slide126.png\" alt=\"\" class=\"wp-image-8817\" srcset=\"https:\/\/www.raziemah.com\/blog\/wp-content\/uploads\/2024\/12\/Slide126.png 600w, https:\/\/www.raziemah.com\/blog\/wp-content\/uploads\/2024\/12\/Slide126-300x200.png 300w\" sizes=\"auto, (max-width: 600px) 100vw, 600px\" \/><\/a><\/figure>\n\n\n\n<p>0393 But that is not all, in&nbsp;<em>the evolution of biomolecular communication,<\/em>&nbsp;symbols overflow&nbsp;<em>destination<sub>2c<\/sub><\/em>&nbsp;and cascade down into&nbsp;<em>the bucket that the transmitter<sub>2a<\/sub>&nbsp;works from<\/em>.<\/p>\n\n\n\n<p>The author spends sections 10.4 through 10.8 discussing the implications of this imaginary overflowing, which reminds me of a Tarot card, the ace of cups, where a hand appears out of cloud overhanging an idyllic landscape.<\/p>\n\n\n\n<p>The hand holds a water-filled cup that overflows, in a very biomolecular-cascading fashion, from a perspective-level that associates to love.&nbsp;&nbsp;Is love an empedoclement?&nbsp;&nbsp;Only after the empedoclements (which are the inverse of impediments) come together, in the right sort of way, does strife arrive to both hone and diversify the new creation.<\/p>\n\n\n\n<p>0394 Here is&nbsp;<em>the cup of organic biosemiosis<\/em>.<\/p>\n\n\n\n<p><\/p>\n","protected":false},"excerpt":{"rendered":"<p>0388 I conclude&nbsp;this examination of Gustavo Caetano-Anolles&#8217; chapter&nbsp;with a brief discussion on the third item appearing in section 10.3, titled, &#8220;Communication&#8221;. 0389&nbsp;The first item that the author mentions&nbsp;is&nbsp;Peirce&#8217;s tradition of inquiry.&nbsp;&nbsp;Peirce&#8217;s three categories offer a variety of ways to portray triadic relations. Biosemiotics is all about triadic relations.&nbsp;&nbsp;This examination has shown that&nbsp;secondness&nbsp;tends to associate to&nbsp;phenomena.&nbsp;&nbsp;Thirdness [&hellip;]<\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[522,210,211,429],"tags":[524,526,125,532,523,39,525,533,529,42,55,527,185,184,124,530,44,35,176],"class_list":["post-8816","post","type-post","status-publish","format-standard","hentry","category-biosemiotics","category-empirio-schematics","category-phenomenology-empirio-schematics","category-positivists-judgment","tag-agency","tag-alexei-sharov","tag-biology","tag-biomolecule","tag-biosemiotics","tag-category-based-nested-form","tag-charles-peirce","tag-communication","tag-empirio-schematicsm-interscope","tag-evolution","tag-interscope","tag-noumenal-overlay","tag-noumenon","tag-phenomena","tag-philosophy","tag-positivists-judgment-2","tag-science","tag-semiotics","tag-sign"],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v26.9 - https:\/\/yoast.com\/product\/yoast-seo-wordpress\/ -->\n<title>Looking at Gustavo Caetano-Anolles&#039; 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